Unfortunately, been there, done that as well...I'm sorry.
There is a slippery slope that you can get to in a hurry here, but if you limit the conversation to the terms and conditions that Dr K was working under, I think it is a black and white situation. Either you believe you should be able have control of your own mind and body in terminal cases, or you don't.
He may have crossed that line in the case of Youk.